Supplementary Table 7. Differentially Expressed Genes, PAXgene
(PaxGene Blood RNA tube/PaxGene Blood miRNA Extraction Kit), Male vs. Female |
gene |
baseMean |
log2FoldChange |
lfcSE |
pvalue |
padj |
hgnc_symbol |
chromosome_name |
start_position |
end_position |
strand |
description |
ENSG00000183878 |
1696.276853 |
16.04407222 |
1.322020515 |
4.03E-209 |
2.15E-204 |
UTY |
Y |
13234577 |
13480673 |
-1 |
ubiquitously transcribed tetratricopeptide repeat
containing |
ENSG00000114374 |
940.2881801 |
17.91455448 |
3.458380855 |
5.24E-186 |
1.40E-181 |
USP9Y |
Y |
12537650 |
12860839 |
1 |
ubiquitin specific
peptidase 9 Y-linked [Source:HGNC Symbol;Acc:HGNC:12633] |
ENSG00000067048 |
903.9684168 |
17.63677847 |
3.195384012 |
1.90E-182 |
3.37E-178 |
DDX3Y |
Y |
12904108 |
12920478 |
1 |
DEAD-box helicase 3 Y-linked [Source:HGNC
Symbol;Acc:HGNC:2699] |
ENSG00000012817 |
922.9056048 |
13.74482401 |
0.808170199 |
9.81E-176 |
1.31E-171 |
KDM5D |
Y |
19703865 |
19744939 |
-1 |
lysine demethylase 5D
[Source:HGNC Symbol;Acc:HGNC:11115] |
ENSG00000291033 |
821.8439063 |
17.70360466 |
3.44379923 |
6.67E-174 |
7.12E-170 |
0 |
Y |
19567313 |
19606274 |
1 |
taxilin gamma pseudogene |
ENSG00000231535 |
470.2887643 |
13.30734931 |
0.974266721 |
3.21E-152 |
2.85E-148 |
LINC00278 |
Y |
3002887 |
3200509 |
1 |
long intergenic
non-protein coding RNA 278 [Source:HGNC Symbol;Acc:HGNC:38712] |
ENSG00000129824 |
435.6015625 |
16.71759663 |
3.371089892 |
2.03E-149 |
1.55E-145 |
RPS4Y1 |
Y |
2841602 |
2932000 |
1 |
ribosomal protein S4 Y-linked 1 [Source:HGNC
Symbol;Acc:HGNC:10425] |
ENSG00000099725 |
435.0418013 |
10.85709708 |
0.437060175 |
6.23E-149 |
4.15E-145 |
PRKY |
Y |
7273972 |
7381548 |
1 |
protein kinase
Y-linked (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9444] |
ENSG00000289707 |
315.4043717 |
16.01466529 |
3.105820175 |
2.50E-139 |
1.48E-135 |
0 |
Y |
21138633 |
21257832 |
1 |
novel transcript |
ENSG00000198692 |
399.0772692 |
13.92997544 |
1.32778197 |
1.07E-132 |
5.73E-129 |
EIF1AY |
Y |
20575776 |
20593154 |
1 |
eukaryotic
translation initiation factor 1A Y-linked [Source:HGNC Symbol;Acc:HGNC:3252] |
ENSG00000067646 |
234.3544594 |
13.15573982 |
1.312757833 |
1.61E-129 |
7.79E-126 |
ZFY |
Y |
2935281 |
2982506 |
1 |
zinc finger protein Y-linked [Source:HGNC
Symbol;Acc:HGNC:12870] |
ENSG00000229807 |
12797.89764 |
-11.69299761 |
0.502711272 |
7.30E-129 |
3.24E-125 |
XIST |
X |
73820649 |
73852723 |
-1 |
X inactive specific
transcript [Source:HGNC Symbol;Acc:HGNC:12810] |
ENSG00000260197 |
48.10038713 |
13.19885321 |
3.050578057 |
2.18E-87 |
8.96E-84 |
0 |
Y |
19691941 |
19694606 |
-1 |
novel transcript |
ENSG00000229236 |
82.7427018 |
9.53561206 |
0.644958067 |
2.34E-84 |
8.90E-81 |
TTTY10 |
Y |
20464916 |
20575519 |
-1 |
testis-specific
transcript |
ENSG00000176728 |
41.76845445 |
12.94881369 |
3.033518739 |
5.52E-81 |
1.96E-77 |
TTTY14 |
Y |
18772706 |
19077416 |
-1 |
testis-specific transcript |
ENSG00000291031 |
34.98990795 |
12.75077252 |
3.042430982 |
2.32E-74 |
7.74E-71 |
0 |
Y |
19455431 |
19567092 |
-1 |
BCL6 corepressor
pseudogene 1 [Source:NCBI gene (formerly Entrezgene);Acc:286554] |
ENSG00000290853 |
21.88586514 |
11.98260527 |
2.972067002 |
4.37E-62 |
1.37E-58 |
0 |
Y |
13703902 |
13888980 |
1 |
novel transcript |
ENSG00000005889 |
1852.996854 |
-0.581463098 |
0.037003216 |
8.21E-57 |
2.43E-53 |
ZFX |
X |
24149173 |
24216255 |
1 |
zinc finger protein
X-linked [Source:HGNC Symbol;Acc:HGNC:12869] |
ENSG00000289826 |
14.34547748 |
11.3177958 |
2.905675113 |
5.14E-56 |
1.44E-52 |
0 |
Y |
7274826 |
7290751 |
1 |
novel transcript |
ENSG00000154620 |
12.84879954 |
11.11545348 |
2.889180398 |
7.45E-53 |
1.99E-49 |
TMSB4Y |
Y |
13703899 |
13706024 |
1 |
thymosin beta 4
Y-linked [Source:HGNC Symbol;Acc:HGNC:11882] |
ENSG00000267793 |
12.38233435 |
11.09467559 |
2.887086053 |
1.18E-52 |
2.98E-49 |
0 |
Y |
19598188 |
19598757 |
1 |
ADAM metallopeptidase domain (ADAM) pseudogene |
ENSG00000288049 |
9.934554076 |
10.73609616 |
2.850467811 |
1.91E-48 |
4.64E-45 |
0 |
Y |
19744756 |
19759978 |
1 |
novel transcript |
ENSG00000241859 |
9.122659975 |
10.45613062 |
2.828179885 |
5.21E-42 |
1.21E-38 |
ANOS2P |
Y |
13751656 |
13915824 |
1 |
anosmin 2 |
ENSG00000277438 |
7.816222052 |
10.37795001 |
2.822727974 |
3.43E-39 |
7.61E-36 |
KDM5DP1 |
Y |
20570222 |
20570519 |
-1 |
lysine demethylase 5D
pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:23976] |
ENSG00000165246 |
7.995702079 |
10.34928746 |
2.821276551 |
1.48E-38 |
3.16E-35 |
NLGN4Y |
Y |
14522573 |
14845654 |
1 |
neuroligin 4 Y-linked [Source:HGNC
Symbol;Acc:HGNC:15529] |
ENSG00000215580 |
8.858679854 |
10.48401393 |
2.841241229 |
1.94E-36 |
3.99E-33 |
BCORP1 |
Y |
19456585 |
19484884 |
-1 |
BCL6 corepressor
pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:23953] |
ENSG00000147050 |
2191.101134 |
-0.702168839 |
0.061965224 |
4.56E-31 |
8.68E-28 |
KDM6A |
X |
44873188 |
45112779 |
1 |
lysine demethylase 6A [Source:HGNC
Symbol;Acc:HGNC:12637] |
ENSG00000126012 |
1663.907522 |
-0.785077238 |
0.069359129 |
5.38E-31 |
9.89E-28 |
KDM5C |
X |
53176283 |
53225422 |
-1 |
lysine demethylase 5C
[Source:HGNC Symbol;Acc:HGNC:11114] |
ENSG00000225470 |
1495.366433 |
-0.598287675 |
0.053115174 |
1.04E-30 |
1.84E-27 |
JPX |
X |
73944182 |
74070408 |
1 |
JPX transcript |
ENSG00000226918 |
7.083845933 |
10.02956112 |
2.798385374 |
1.12E-30 |
1.93E-27 |
0 |
Y |
21311268 |
21318895 |
1 |
RNA binding motif
protein |
ENSG00000231340 |
5.402112301 |
-7.4501516 |
1.285951698 |
8.03E-28 |
1.34E-24 |
ACTG1P10 |
X |
53142832 |
53143913 |
-1 |
actin gamma 1 pseudogene 10 [Source:HGNC
Symbol;Acc:HGNC:155] |
ENSG00000130021 |
157.4577871 |
-0.626740541 |
0.06048147 |
1.99E-26 |
3.22E-23 |
PUDP |
X |
6667865 |
7148158 |
-1 |
pseudouridine
5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:16818] |
ENSG00000183943 |
1101.121796 |
-0.629889835 |
0.061744361 |
1.07E-25 |
1.67E-22 |
PRKX |
X |
3604340 |
3713649 |
-1 |
protein kinase cAMP-dependent X-linked catalytic
subunit [Source:HGNC Symbol;Acc:HGNC:9441] |
ENSG00000286009 |
4.281878073 |
9.384577718 |
2.734637292 |
2.22E-25 |
3.38E-22 |
0 |
Y |
12661309 |
12663478 |
-1 |
novel transcript |
ENSG00000233070 |
3.907428849 |
9.140369402 |
2.704885035 |
2.44E-24 |
3.62E-21 |
ZFY-AS1 |
Y |
2966844 |
3002626 |
-1 |
ZFY antisense RNA 1 [Source:HGNC
Symbol;Acc:HGNC:38798] |
ENSG00000232634 |
3.760802764 |
8.718611084 |
2.661199371 |
4.15E-22 |
5.98E-19 |
NEFLP1 |
Y |
21221106 |
21222089 |
-1 |
neurofilament light
pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:37662] |
ENSG00000226555 |
2.583005587 |
8.400369644 |
2.628780303 |
2.45E-19 |
3.43E-16 |
AGKP1 |
Y |
14639096 |
14640358 |
1 |
AGK pseudogene 1 [Source:HGNC
Symbol;Acc:HGNC:37661] |
ENSG00000251996 |
2.425625385 |
8.294889142 |
2.630043875 |
1.00E-16 |
1.31E-13 |
0 |
Y |
7341531 |
7341642 |
1 |
Y RNA
[Source:RFAM;Acc:RF00019] |
ENSG00000280969 |
2.781695748 |
8.416682894 |
2.659211129 |
2.78E-15 |
3.53E-12 |
RPS4Y2 |
Y |
20756108 |
20781032 |
1 |
ribosomal protein S4 Y-linked 2 [Source:HGNC
Symbol;Acc:HGNC:18501] |
ENSG00000286431 |
30.10849823 |
-0.949424255 |
0.126573335 |
3.02E-15 |
3.74E-12 |
0 |
X |
3819924 |
3823898 |
1 |
novel transcript |
ENSG00000229163 |
1.752615003 |
7.930902543 |
2.587021076 |
3.36E-15 |
4.07E-12 |
NAP1L1P2 |
Y |
2929001 |
2931120 |
-1 |
nucleosome assembly protein 1 like 1 pseudogene 2
[Source:HGNC Symbol;Acc:HGNC:38005] |
ENSG00000186871 |
9.726775321 |
-1.606111386 |
0.219496569 |
1.64E-14 |
1.94E-11 |
ERCC6L |
X |
72204657 |
72239027 |
-1 |
ERCC excision repair
6 like |
ENSG00000289472 |
64.99207969 |
-0.707365959 |
0.098870394 |
4.29E-14 |
4.97E-11 |
0 |
X |
24168659 |
24169609 |
1 |
novel transcript |
ENSG00000291034 |
5.30807577 |
9.452821412 |
2.837111363 |
2.89E-13 |
3.21E-10 |
0 |
Y |
12088010 |
12421587 |
-1 |
novel transcript |
ENSG00000227329 |
2.51187412 |
-3.631114857 |
0.637219945 |
5.38E-11 |
5.85E-08 |
0 |
X |
53164391 |
53164557 |
-1 |
pseudogene similar to part of suppressor of
variegation 3-9 homolog 2 (SUV39H2) |
ENSG00000287098 |
4.762607611 |
-2.203459281 |
0.366458733 |
8.43E-11 |
8.99E-08 |
0 |
X |
40620701 |
40622109 |
-1 |
novel transcript |
ENSG00000278847 |
1.352536595 |
7.076622008 |
2.500609862 |
9.47E-11 |
9.90E-08 |
0 |
Y |
2934406 |
2934771 |
-1 |
novel transcript |
ENSG00000229308 |
2.298378994 |
7.817977005 |
2.630817793 |
2.64E-10 |
2.65E-07 |
0 |
Y |
4036497 |
4100320 |
1 |
novel transcript |
ENSG00000286247 |
1.525016795 |
7.323843625 |
2.581130198 |
8.69E-09 |
8.42E-06 |
0 |
Y |
20725331 |
20734526 |
-1 |
novel transcript |
ENSG00000089472 |
28.44471336 |
-2.327444398 |
0.470766089 |
8.89E-09 |
8.47E-06 |
HEPH |
X |
66162671 |
66268867 |
1 |
hephaestin
[Source:HGNC Symbol;Acc:HGNC:4866] |
ENSG00000184368 |
17.123877 |
-2.424613427 |
0.508903131 |
2.41E-08 |
2.26E-05 |
MAP7D2 |
X |
20006713 |
20116907 |
-1 |
MAP7 domain containing 2 [Source:HGNC
Symbol;Acc:HGNC:25899] |
ENSG00000201592 |
21.46085716 |
-0.8240855 |
0.167463833 |
3.56E-08 |
3.27E-05 |
0 |
X |
20136306 |
20136385 |
-1 |
0 |
ENSG00000173674 |
557.8337887 |
-0.657882471 |
0.143202746 |
1.80E-07 |
0.000160391 |
EIF1AX |
X |
20124525 |
20141838 |
-1 |
eukaryotic translation initiation factor 1A
X-linked [Source:HGNC Symbol;Acc:HGNC:3250] |
ENSG00000235262 |
12.72976381 |
-0.780405611 |
0.182574965 |
7.20E-07 |
0.000629678 |
KDM5C-IT1 |
X |
53212408 |
53214679 |
-1 |
KDM5C intronic
transcript 1 [Source:HGNC Symbol;Acc:HGNC:41384] |
ENSG00000286217 |
4.076078201 |
8.703630254 |
3.014279275 |
7.89E-06 |
0.00618901 |
LINC00279 |
Y |
8550518 |
8713825 |
1 |
long intergenic non-protein coding RNA 279
[Source:HGNC Symbol;Acc:HGNC:38724] |
ENSG00000070526 |
29.54125857 |
-0.804327641 |
0.228962812 |
1.74E-05 |
0.013480731 |
ST6GALNAC1 |
17 |
76624761 |
76643786 |
-1 |
ST6
N-acetylgalactosaminide alpha-2 |
ENSG00000276575 |
4.287613356 |
-1.14289781 |
0.328903491 |
1.87E-05 |
0.014244975 |
MIR6895 |
X |
53195411 |
53195488 |
-1 |
microRNA 6895 [Source:HGNC Symbol;Acc:HGNC:50210] |
ENSG00000200795 |
247.3960151 |
0.666712263 |
0.202712307 |
3.47E-05 |
0.025012911 |
RNU4-1 |
12 |
120293097 |
120293237 |
-1 |
RNA |
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