Supplementary Table 9. Differentially Expressed Genes, Zymo MF
(Sarstedt-Minivette untreated/Zymo Quick-RNA Whole Blood MF) Male vs. Female |
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gene |
baseMean |
log2FoldChange |
lfcSE |
pvalue |
padj |
hgnc_symbol |
chromosome_name |
start_position |
end_position |
strand |
description |
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|
ENSG00000055732 |
7.604858143 |
-1.581563049 |
0.331596792 |
9.53E-08 |
5.67E-05 |
MCOLN3 |
1 |
85018082 |
85048500 |
-1 |
mucolipin TRP cation channel 3 [Source:HGNC
Symbol;Acc:HGNC:13358] |
|
ENSG00000291077 |
9.871143978 |
1.105397845 |
0.362065469 |
8.88E-05 |
0.032348626 |
0 |
1 |
16215907 |
16217425 |
-1 |
novel transcript |
|
ENSG00000124490 |
9.95119696 |
1.27160151 |
0.379589288 |
3.03E-05 |
0.014152923 |
CRISP2 |
6 |
49692358 |
49713590 |
-1 |
cysteine rich secretory protein 2 [Source:HGNC
Symbol;Acc:HGNC:12024] |
|
ENSG00000146535 |
502.7904034 |
0.731827017 |
0.1900784 |
4.47E-06 |
0.002463663 |
GNA12 |
7 |
2728105 |
2844308 |
-1 |
G protein subunit
alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380] |
|
ENSG00000254288 |
12.60087868 |
-0.630080314 |
0.190252818 |
3.64E-05 |
0.016243464 |
0 |
8 |
74052340 |
74099853 |
1 |
novel transcript |
|
ENSG00000254275 |
13.50430602 |
-0.912569586 |
0.306427489 |
9.30E-05 |
0.033176587 |
LINC00824 |
8 |
128405269 |
128564679 |
-1 |
long intergenic
non-protein coding RNA 824 [Source:HGNC Symbol;Acc:HGNC:50281] |
|
ENSG00000265735 |
5912.113403 |
0.866626578 |
0.272026509 |
5.30E-05 |
0.02145048 |
RN7SL5P |
9 |
9442060 |
9442380 |
1 |
RNA |
|
ENSG00000215548 |
9.360402443 |
1.303518912 |
0.46498113 |
0.000153039 |
0.048862827 |
FRG1JP |
9 |
63832127 |
63859641 |
-1 |
FSHD region gene 1
family member J |
|
ENSG00000171840 |
748.9717591 |
0.5823818 |
0.177836787 |
3.88E-05 |
0.017047297 |
NINJ2 |
12 |
564296 |
663589 |
-1 |
ninjurin 2 [Source:HGNC Symbol;Acc:HGNC:7825] |
|
ENSG00000166147 |
49.62322971 |
0.742832232 |
0.205270282 |
1.08E-05 |
0.005467963 |
FBN1 |
15 |
48408313 |
48645721 |
-1 |
fibrillin 1
[Source:HGNC Symbol;Acc:HGNC:3603] |
|
ENSG00000258476 |
204.2446173 |
0.827384729 |
0.254956418 |
4.04E-05 |
0.017526828 |
LINC02207 |
15 |
93835490 |
93878822 |
1 |
long intergenic non-protein coding RNA 2207
[Source:HGNC Symbol;Acc:HGNC:53073] |
|
ENSG00000099365 |
7.184082254 |
0.821246526 |
0.266056316 |
7.00E-05 |
0.027934414 |
STX1B |
16 |
30989256 |
31010638 |
-1 |
syntaxin 1B
[Source:HGNC Symbol;Acc:HGNC:18539] |
|
ENSG00000140986 |
26.45649267 |
1.702869264 |
0.588339515 |
0.00012077 |
0.040702055 |
RPL3L |
16 |
1943974 |
1957606 |
-1 |
ribosomal protein L3 like [Source:HGNC
Symbol;Acc:HGNC:10351] |
|
ENSG00000178297 |
109.2716225 |
0.782528461 |
0.254689123 |
7.45E-05 |
0.028964691 |
TMPRSS9 |
19 |
2360238 |
2426261 |
1 |
transmembrane serine
protease 9 [Source:HGNC Symbol;Acc:HGNC:30079] |
|
ENSG00000242114 |
6.389296347 |
-0.780977864 |
0.244056765 |
4.90E-05 |
0.020074467 |
MTFP1 |
22 |
30425623 |
30429054 |
1 |
mitochondrial fission process 1 [Source:HGNC
Symbol;Acc:HGNC:26945] |
|
ENSG00000173674 |
717.8047042 |
-0.599596968 |
0.057069972 |
3.93E-27 |
4.25E-24 |
EIF1AX |
X |
20124525 |
20141838 |
-1 |
eukaryotic
translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250] |
|
ENSG00000089472 |
11.37634102 |
-2.886095609 |
0.276631023 |
1.76E-26 |
1.84E-23 |
HEPH |
X |
66162671 |
66268867 |
1 |
hephaestin [Source:HGNC Symbol;Acc:HGNC:4866] |
|
ENSG00000183943 |
791.5904138 |
-0.596014091 |
0.065661114 |
4.15E-21 |
3.94E-18 |
PRKX |
X |
3604340 |
3713649 |
-1 |
protein kinase
cAMP-dependent X-linked catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9441] |
|
ENSG00000130021 |
115.3757486 |
-0.651429325 |
0.074564491 |
1.03E-19 |
8.90E-17 |
PUDP |
X |
6667865 |
7148158 |
-1 |
pseudouridine 5'-phosphatase [Source:HGNC
Symbol;Acc:HGNC:16818] |
|
ENSG00000169249 |
270.4115834 |
-0.583651256 |
0.073317604 |
8.25E-17 |
6.76E-14 |
ZRSR2 |
X |
15790156 |
15830694 |
1 |
zinc finger CCCH-type |
|
ENSG00000184368 |
5.247250161 |
-2.306576413 |
0.29834182 |
7.15E-16 |
5.71E-13 |
MAP7D2 |
X |
20006713 |
20116907 |
-1 |
MAP7 domain containing 2 [Source:HGNC
Symbol;Acc:HGNC:25899] |
|
ENSG00000225470 |
620.694406 |
-0.622902639 |
0.100225315 |
2.31E-11 |
1.67E-08 |
JPX |
X |
73944182 |
74070408 |
1 |
JPX transcript |
|
ENSG00000186871 |
8.090934554 |
-1.324243139 |
0.234463892 |
1.07E-09 |
6.91E-07 |
ERCC6L |
X |
72204657 |
72239027 |
-1 |
ERCC excision repair 6 like |
|
ENSG00000289472 |
16.25999637 |
-0.931658813 |
0.197982425 |
1.25E-07 |
7.30E-05 |
0 |
X |
24168659 |
24169609 |
1 |
novel transcript |
|
ENSG00000285679 |
12.03488374 |
-0.859323065 |
0.214248979 |
2.41E-06 |
0.00135374 |
0 |
X |
7928443 |
8374386 |
1 |
novel transcript |
|
ENSG00000286431 |
7.338728436 |
-0.905590497 |
0.241411701 |
7.14E-06 |
0.003799803 |
0 |
X |
3819924 |
3823898 |
1 |
novel transcript |
|
ENSG00000198692 |
2661.043621 |
15.62287396 |
0.987627453 |
3.01E-196 |
9.14E-192 |
EIF1AY |
Y |
20575776 |
20593154 |
1 |
eukaryotic translation initiation factor 1A
Y-linked [Source:HGNC Symbol;Acc:HGNC:3252] |
|
ENSG00000183878 |
1232.74583 |
18.12484277 |
3.478950808 |
7.14E-189 |
1.08E-184 |
UTY |
Y |
13234577 |
13480673 |
-1 |
ubiquitously
transcribed tetratricopeptide repeat containing |
|
ENSG00000067048 |
1254.16977 |
15.40017528 |
1.32051503 |
1.26E-186 |
1.27E-182 |
DDX3Y |
Y |
12904108 |
12920478 |
1 |
DEAD-box helicase 3 Y-linked [Source:HGNC
Symbol;Acc:HGNC:2699] |
|
ENSG00000114374 |
584.3249452 |
16.9660539 |
3.39325374 |
3.89E-160 |
2.95E-156 |
USP9Y |
Y |
12537650 |
12860839 |
1 |
ubiquitin specific
peptidase 9 Y-linked [Source:HGNC Symbol;Acc:HGNC:12633] |
|
ENSG00000012817 |
522.941775 |
16.7933365 |
3.379752943 |
1.57E-157 |
9.53E-154 |
KDM5D |
Y |
19703865 |
19744939 |
-1 |
lysine demethylase 5D [Source:HGNC
Symbol;Acc:HGNC:11115] |
|
ENSG00000129824 |
527.7738727 |
14.1473107 |
1.319490244 |
5.80E-153 |
2.93E-149 |
RPS4Y1 |
Y |
2841602 |
2932000 |
1 |
ribosomal protein S4
Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425] |
|
ENSG00000291033 |
462.294261 |
16.60121365 |
3.366430599 |
1.78E-151 |
7.73E-148 |
0 |
Y |
19567313 |
19606274 |
1 |
taxilin gamma pseudogene |
|
ENSG00000231535 |
349.7329432 |
16.16369437 |
3.331922644 |
1.07E-140 |
4.04E-137 |
LINC00278 |
Y |
3002887 |
3200509 |
1 |
long intergenic
non-protein coding RNA 278 [Source:HGNC Symbol;Acc:HGNC:38712] |
|
ENSG00000067646 |
404.9891347 |
12.87845977 |
0.971641281 |
4.90E-139 |
1.65E-135 |
ZFY |
Y |
2935281 |
2982506 |
1 |
zinc finger protein Y-linked [Source:HGNC
Symbol;Acc:HGNC:12870] |
|
ENSG00000289707 |
198.991298 |
15.25785208 |
3.243115725 |
6.91E-115 |
2.10E-111 |
0 |
Y |
21138633 |
21257832 |
1 |
novel transcript |
|
ENSG00000099725 |
152.3232819 |
9.413123735 |
0.48224313 |
2.49E-105 |
6.86E-102 |
PRKY |
Y |
7273972 |
7381548 |
1 |
protein kinase Y-linked (pseudogene) [Source:HGNC
Symbol;Acc:HGNC:9444] |
|
ENSG00000229236 |
67.466153 |
9.350200462 |
0.707680133 |
2.21E-79 |
5.59E-76 |
TTTY10 |
Y |
20464916 |
20575519 |
-1 |
testis-specific
transcript |
|
ENSG00000176728 |
36.70850861 |
12.55367788 |
3.016609336 |
8.89E-72 |
2.07E-68 |
TTTY14 |
Y |
18772706 |
19077416 |
-1 |
testis-specific transcript |
|
ENSG00000154620 |
22.25392406 |
11.78657065 |
2.955859852 |
1.88E-61 |
4.08E-58 |
TMSB4Y |
Y |
13703899 |
13706024 |
1 |
thymosin beta 4
Y-linked [Source:HGNC Symbol;Acc:HGNC:11882] |
|
ENSG00000233070 |
16.55130966 |
11.2770204 |
2.911802549 |
1.67E-50 |
3.38E-47 |
ZFY-AS1 |
Y |
2966844 |
3002626 |
-1 |
ZFY antisense RNA 1 [Source:HGNC
Symbol;Acc:HGNC:38798] |
|
ENSG00000260197 |
13.22894089 |
10.95021583 |
2.874638797 |
3.29E-50 |
6.23E-47 |
0 |
Y |
19691941 |
19694606 |
-1 |
novel transcript |
|
ENSG00000291031 |
13.88279931 |
11.01978502 |
2.885526489 |
6.12E-47 |
1.09E-43 |
0 |
Y |
19455431 |
19567092 |
-1 |
BCL6 corepressor pseudogene 1 [Source:NCBI gene
(formerly Entrezgene);Acc:286554] |
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ENSG00000290853 |
10.13623316 |
10.51522755 |
2.833065296 |
7.29E-45 |
1.23E-41 |
0 |
Y |
13703902 |
13888980 |
1 |
novel transcript |
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ENSG00000229308 |
7.351559639 |
9.909921598 |
2.782281845 |
6.68E-33 |
1.01E-29 |
0 |
Y |
4036497 |
4100320 |
1 |
novel transcript |
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ENSG00000280969 |
8.950836299 |
10.2500925 |
2.823601706 |
9.53E-33 |
1.38E-29 |
RPS4Y2 |
Y |
20756108 |
20781032 |
1 |
ribosomal protein S4
Y-linked 2 [Source:HGNC Symbol;Acc:HGNC:18501] |
|
ENSG00000267793 |
5.779379838 |
9.550425672 |
2.738197547 |
1.33E-32 |
1.83E-29 |
0 |
Y |
19598188 |
19598757 |
1 |
ADAM metallopeptidase domain (ADAM) pseudogene |
|
ENSG00000241859 |
5.241521416 |
9.376874655 |
2.714199652 |
3.40E-32 |
4.48E-29 |
ANOS2P |
Y |
13751656 |
13915824 |
1 |
anosmin 2 |
|
ENSG00000289826 |
4.730773105 |
9.212789333 |
2.698282005 |
2.31E-29 |
2.93E-26 |
0 |
Y |
7274826 |
7290751 |
1 |
novel transcript |
|
ENSG00000288049 |
4.36458382 |
9.03307976 |
2.684183617 |
9.43E-28 |
1.14E-24 |
0 |
Y |
19744756 |
19759978 |
1 |
novel transcript |
|
ENSG00000286009 |
4.367644246 |
9.103030151 |
2.693405493 |
1.13E-27 |
1.32E-24 |
0 |
Y |
12661309 |
12663478 |
-1 |
novel transcript |
|
ENSG00000165246 |
4.021114729 |
8.902493109 |
2.668647479 |
3.56E-27 |
4.00E-24 |
NLGN4Y |
Y |
14522573 |
14845654 |
1 |
neuroligin 4 Y-linked
[Source:HGNC Symbol;Acc:HGNC:15529] |
|
ENSG00000277438 |
3.327155194 |
8.606301115 |
2.639804649 |
1.00E-23 |
9.80E-21 |
KDM5DP1 |
Y |
20570222 |
20570519 |
-1 |
lysine demethylase 5D pseudogene 1 [Source:HGNC
Symbol;Acc:HGNC:23976] |
|
ENSG00000286247 |
2.897381486 |
8.350627358 |
2.613616261 |
7.22E-20 |
6.44E-17 |
0 |
Y |
20725331 |
20734526 |
-1 |
novel transcript |
|
ENSG00000226918 |
2.88016392 |
8.319034952 |
2.625015496 |
3.38E-18 |
2.85E-15 |
0 |
Y |
21311268 |
21318895 |
1 |
RNA binding motif protein |
|
ENSG00000290840 |
2.031406256 |
7.743878791 |
2.602090028 |
3.49E-11 |
2.41E-08 |
XGY2 |
Y |
2752083 |
2854641 |
1 |
XG pseudogene |
|
ENSG00000291034 |
1.302390472 |
6.832660992 |
2.467461473 |
3.77E-10 |
2.48E-07 |
0 |
Y |
12088010 |
12421587 |
-1 |
novel transcript |
|
ENSG00000212856 |
0.596555198 |
5.338756347 |
2.346052932 |
0.000146874 |
0.047903178 |
TTTY2B |
Y |
6406244 |
6462091 |
-1 |
testis-specific
transcript |
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